CDS

Accession Number TCMCG016C22518
gbkey CDS
Protein Id OMO60858.1
Location complement(join(5445..5687,5794..5952,6437..6697,10618..10686,10881..11003,11111..11208,11530..11668,12264..12337,12542..12630,13505..13608,13879..14030,14404..15019))
Organism Corchorus capsularis
locus_tag CCACVL1_23830

Protein

Length 708aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01013635.1
Definition hypothetical protein CCACVL1_23830 [Corchorus capsularis]
Locus_tag CCACVL1_23830

EGGNOG-MAPPER Annotation

COG_category S
Description Protein POLLEN DEFECTIVE IN GUIDANCE
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005788        [VIEW IN EMBL-EBI]
GO:0006935        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010183        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032507        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0035437        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042330        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0045185        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048868        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0050918        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051235        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051651        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070972        [VIEW IN EMBL-EBI]
GO:0072595        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTTGAAATCGTCAGGCAGAAAGCTTTCTTTCGATATTTTAAGCAATACCAGCTATCTAGAAGAAGAATACGACCGATCTTTAGTTTACCGATCGAATTCAGATCCAATCCAATCTCAAAACGGCGTCGCTCAACCCTCCCGTGATAGTCGGAAGAAGAGGAAGAAACACAAGAAGAAGAAGGATGCAACGGTTGAGTTCCCGATTATTCGGGAAGATCCGGTAGCGGAACAGAGCGGCGAGGGCGGCGTTGCGGCGGAGTCGAATTCCGAGAATTTCGGGATCAGGGAAAACGGGAACGTTAACAGGATTAGTTATATCGGTGGCGGGAGCGTTGTGGTGCTAGAAGAGAGCGTGTCTCAGAATGTGTGTGGTTTTGGGGAGTTGAGACAGAGGAATGTCAATGGAGTTGTCGGTGGCGGAGGGGAGGAGACGGCGACAGCGACAGCGACGGCGACAGCGACAGCGGAGGAGAGTGGTGTGGAGGTGAGTAGTTTAAAGGAGCCTTTGCAGCCGTCACCACCTCAGCCAGTGGCGAATGGGAATGCGGTGAATAGGCTGGAGACAGCTGAGTCGTTAGATTGGAAGCGGCTCATGGCAGAGGATCCTAATAATCTTTTCACAGTGGATAAATCACCTGTGAAATACTTTTTGGAAGAAATGCACAATGGAAATTCATTGCGGAGCACCACAACTTTTGGTAGTGAGAAAGAACGAGAAAGAGTGTATGACACCATCTTCCGCTTGCCATGGAGATGTGAAGTGCTTATAAATGTTGGCTTCTTCGTCTGCTTCGATTCGTTTCTATCCTTGTTAACTATCATGCCAACAAGGATTCTTATTACGCTTTGGAGGCTCCTGACTACAAGGCAGTTTAAGAGGCCTTCTGCAGCAGAACTGTGTGATTTTGGCTGCTTTGTTGTTTTAGCCTGTGGAGTCCTCCTCCTAGAGCGAACAGATATCAGCTTGATATATCACATGATTCGTGGTCAAGGAACAATCAAACTCTACGTGGTTTATAATGTGCTGGAGGCAATCACTTTGTCAACTTGCATTGTCGCACATAATAATGCATTATTTGCTTTGTTGGTGTCCAATAACTTTGCTGAGATAAAAAGCAATGTCTTTAAACGTTTTAGCAAGGGTAATATCCACAGTCTTGTATACTCAGATTCTGTAGAGAGATTCCATATTTCAGCATTTCTCTTATTCGTTTTAGCTCAAAATATTTTGGAAGCTGAGGGTCCTTGGTTCGAAAGTTTTATTTGTAATGCGCTCGTGGTATTTTTCTGTGAAATGTTAATTGATATCATAAAACATTCATTCCTTGCCAAATTCAATGACATAAAGCCCATTGCATACTCCGAATTTCTTGAAGATCTCTGCAAGCAGACTTTGAATATACAAACTGAAAATGTCAAGAAAAACCTCACTTTTGTTCCTCTTGCACCAGCTTGTGTGGTGGGTGGTGGGCTATACATAAAGAGGAAAACAGATTGGCTTAGTACAATTCTGCAAACAGAGTTCTTTGGTTCTTGCAATGATCATCAAGAGCTGAGGAAAAATGAGAGAAATGTCTTCTGCATTGACTGTAGTCTCGGCTGTTGCAGACATTGCAAGGGTCACGGCAATCATCGCTCTCTTCAGATCTGCAAATATGTTTATCAAGATGTTGTTCGCCTTCAAGAGATTCAGAAACATCTAGACTGTTCTAAAATTCAGACATATAAAATCAATGGTGAAAAAGCTGTACATTTGAATCCCAGGCCTCAAGCCAAAGATGCCAAGCCATCAACAAAAATAAAAACTGGTGCTTCCTGTGAAACTTGTAGAAGATATCTTCAAGACCCTCCTAATCGCTTTTGTTCCATTGCATGCAAGGTTTTAGCTGTTGATGTGAAGCCTAAAGTGATCAGAAGTGTGAAAATTGAACTGGAAATGCAAGAAATTCCTGATCTTTCCTGGAAAGACAATCAAAATTCAGAAGCAAGTACAGAAGAAAAGCAATCTTCACTCTCATCAACCGATGTTTCAGAAGAGACTAAGACATGTGTGAGGTGTTTAAAGCCCAGAAAACGAGTGCACAAAAGGAAAGGCATTCCTCATAGAGCTCCTCTCATTTAA
Protein:  
MALKSSGRKLSFDILSNTSYLEEEYDRSLVYRSNSDPIQSQNGVAQPSRDSRKKRKKHKKKKDATVEFPIIREDPVAEQSGEGGVAAESNSENFGIRENGNVNRISYIGGGSVVVLEESVSQNVCGFGELRQRNVNGVVGGGGEETATATATATATAEESGVEVSSLKEPLQPSPPQPVANGNAVNRLETAESLDWKRLMAEDPNNLFTVDKSPVKYFLEEMHNGNSLRSTTTFGSEKERERVYDTIFRLPWRCEVLINVGFFVCFDSFLSLLTIMPTRILITLWRLLTTRQFKRPSAAELCDFGCFVVLACGVLLLERTDISLIYHMIRGQGTIKLYVVYNVLEAITLSTCIVAHNNALFALLVSNNFAEIKSNVFKRFSKGNIHSLVYSDSVERFHISAFLLFVLAQNILEAEGPWFESFICNALVVFFCEMLIDIIKHSFLAKFNDIKPIAYSEFLEDLCKQTLNIQTENVKKNLTFVPLAPACVVGGGLYIKRKTDWLSTILQTEFFGSCNDHQELRKNERNVFCIDCSLGCCRHCKGHGNHRSLQICKYVYQDVVRLQEIQKHLDCSKIQTYKINGEKAVHLNPRPQAKDAKPSTKIKTGASCETCRRYLQDPPNRFCSIACKVLAVDVKPKVIRSVKIELEMQEIPDLSWKDNQNSEASTEEKQSSLSSTDVSEETKTCVRCLKPRKRVHKRKGIPHRAPLI